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STRINGSTRING
PP1S241_60V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S241_60V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S241_60V6.1Predicted protein (128 aa)    
Predicted Functional Partners:
PP1S316_6V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
     
 
  0.989
PP1S271_98V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
     
 
  0.989
PP1S97_259V6.1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family (62 aa)
     
 
  0.989
PP1S283_53V6.1
Predicted protein (62 aa)
     
 
  0.989
PP1S22_171V6.1
Predicted protein (62 aa)
     
 
  0.989
PP1S22_155V6.1
Predicted protein; Belongs to the eukaryotic ribosomal protein eS30 family (62 aa)
     
 
  0.989
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
     
 
  0.988
PP1S59_122V6.1
60S ribosomal protein L6 ; Belongs to the eukaryotic ribosomal protein eL6 family (228 aa)
     
 
  0.988
PP1S30_44V6.1
60S ribosomal protein L6 ; Belongs to the eukaryotic ribosomal protein eL6 family (231 aa)
     
 
  0.988
PP1S126_115V6.2
60S ribosomal protein L6 ; Belongs to the eukaryotic ribosomal protein eL6 family (231 aa)
     
 
  0.988
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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