STRINGSTRING
PP1S241_65V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S241_65V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S241_65V6.1Annotation not available (216 aa)    
Predicted Functional Partners:
PP1S25_361V6.1
Predicted protein (476 aa)
       
      0.919
PP1S142_119V6.1
Annotation not available (445 aa)
       
      0.919
PP1S65_125V6.1
Annotation not available (684 aa)
       
      0.867
PP1S396_25V6.1
PpC1 protein (763 aa)
       
      0.867
PP1S54_122V6.1
Predicted protein (632 aa)
       
      0.636
PP1S197_66V6.1
Predicted protein (652 aa)
       
      0.636
PP1S145_161V6.1
Predicted protein (331 aa)
   
 
      0.521
PP1S74_170V6.1
Predicted protein (191 aa)
           
  0.407
PP1S70_115V6.1
Predicted protein (233 aa)
           
  0.407
PP1S52_51V6.1
Predicted protein; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (211 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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