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STRINGSTRING
PSBS protein (Physcomitrella patens) - STRING interaction network
"PSBS" - Photosystem II 22kDa chloroplast protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSBSPhotosystem II 22kDa chloroplast protein (280 aa)    
Predicted Functional Partners:
PP1S429_33V6.2
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (318 aa)
     
   
  0.948
PP1S214_87V6.1
Predicted protein (303 aa)
     
   
  0.948
PP1S214_86V6.1
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (323 aa)
     
   
  0.948
PP1S197_123V6.1
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (287 aa)
     
   
  0.948
PP1S472_15V6.1
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (296 aa)
     
   
  0.943
PP1S472_14V6.1
Predicted protein; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (296 aa)
     
   
  0.943
PP1S155_36V6.1
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (296 aa)
     
   
  0.943
PP1S155_34V6.1
Predicted protein; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (296 aa)
     
   
  0.943
PP1S3_520V6.1
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (166 aa)
     
   
  0.902
PP1S27_130V6.1
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (167 aa)
     
   
  0.902
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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