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ppabci18 protein (Physcomitrella patens) - STRING interaction network
"ppabci18" - ATP-binding cassette transporter, subfamily I, member 18, ABC component protein PpABCI18 in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppabci18ATP-binding cassette transporter, subfamily I, member 18, ABC component protein PpABCI18 (260 aa)    
Predicted Functional Partners:
ppabci17
ATP-binding cassette transporter, subfamily I, member 17, ABC component protein PpABCI17 (542 aa)
 
  0.993
ppabci11
ATP-binding cassette transporter, subfamily I, member 11, ABC component protein PpABCI11 (573 aa)
 
  0.993
ppabci15
ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (573 aa)
 
  0.993
PP1S143_140V6.1
Annotation not available (134 aa)
 
  0.993
ppabci10
ATP-binding cassette transporter, subfamily I, member 10, ABC component protein PpABCI10 (555 aa)
 
  0.993
PP1S188_89V6.1
Annotation not available (420 aa)
 
  0.992
PP1S20_135V6.1
Predicted protein (719 aa)
   
 
  0.933
PP1S77_317V6.1
Predicted protein (360 aa)
   
 
  0.927
PP1S23_324V6.1
Predicted protein (366 aa)
   
 
  0.927
PP1S16_130V6.1
Annotation not available (479 aa)
 
 
  0.892
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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