STRINGSTRING
PP1S245_56V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S245_56V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S245_56V6.1Predicted protein (384 aa)    
Predicted Functional Partners:
PP1S105_41V6.3
Annotation not available (254 aa)
     
  0.970
RanB1
Ran-family small GTPase (223 aa)
         
  0.804
PP1S44_114V6.1
Annotation not available (223 aa)
         
  0.804
RanA1
Ran-family small GTPase; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (223 aa)
         
  0.804
RanA2
Ran-family small GTPase; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (223 aa)
         
  0.804
PP1S10_205V6.1
Predicted protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (223 aa)
         
  0.804
PP1S41_19V6.1
Predicted protein (874 aa)
     
  0.775
PP1S14_125V6.1
Predicted protein (881 aa)
     
  0.775
PP1S50_208V6.1
Annotation not available (765 aa)
     
 
  0.749
PP1S389_45V6.1
Annotation not available (810 aa)
     
 
  0.749
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (7%) [HD]