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3989049 protein (Physcomitrella patens) - STRING interaction network
"3989049" - Cytochrome c biogenesis factor N in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
3989049Cytochrome c biogenesis factor N (743 aa)    
Predicted Functional Partners:
PP1S55_97V6.1
Cytochrome c-type biogenesis protein (162 aa)
 
 
  0.986
PP1S34_163V6.1
Predicted protein (317 aa)
 
 
  0.975
nad1
NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family (87 aa)
     
   
  0.940
nad4
annotation not available (83 aa)
     
   
  0.930
3989102
Ribosomal protein S1 (91 aa)
           
  0.899
3989061
NADH dehydrogenase subunit 7 (298 aa)
   
   
  0.893
PP1S2633_1V6.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (701 aa)
   
   
  0.775
PP1S49_272V6.1
Predicted protein (625 aa)
     
   
  0.770
PP1S456_23V6.1
Predicted protein (521 aa)
   
   
  0.745
PP1S248_62V6.2
Predicted protein (350 aa)
         
  0.716
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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