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STRINGSTRING
PP1S247_27V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S247_27V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S247_27V6.1annotation not available (539 aa)    
Predicted Functional Partners:
PP1S323_56V6.1
Predicted protein; Belongs to the SecY/SEC61-alpha family (477 aa)
     
        0.876
PP1S114_48V6.1
Predicted protein; Belongs to the SecY/SEC61-alpha family (477 aa)
     
        0.876
PP1S641_1V6.1
Predicted protein (807 aa)
       
      0.844
PP1S42_258V6.1
Predicted protein (397 aa)
     
        0.662
PP1S68_188V6.1
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (236 aa)
     
 
  0.626
PP1S226_55V6.3
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (243 aa)
     
 
  0.626
PP1S213_66V6.1
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (248 aa)
     
 
  0.626
PP1S48_107V6.1
Signal peptidase I (180 aa)
     
   
  0.600
PP1S145_78V6.1
Signal peptidase I (180 aa)
     
   
  0.600
PP1S55_148V6.1
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors; Belongs to the peptidase A22A family (477 aa)
       
 
  0.589
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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