STRINGSTRING
PP1S249_30V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S249_30V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S249_30V6.1Predicted protein (293 aa)    
Predicted Functional Partners:
PP1S9_108V6.2
Annotation not available (276 aa)
     
  0.975
PP1S105_58V6.1
Predicted protein (433 aa)
     
  0.970
PP1S6_227V6.1
Annotation not available (810 aa)
     
 
  0.625
PP1S1_519V6.1
Annotation not available (812 aa)
     
 
  0.625
PP1S133_82V6.1
Annotation not available (835 aa)
     
 
  0.625
PP1S102_82V6.1
Annotation not available (808 aa)
     
 
  0.625
PP1S266_15V6.1
Tubulin gamma chain ; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (475 aa)
         
  0.608
TUBG1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome, suggesting that it is involved in the minus-end nucleation of microtubule assembly (475 aa)
         
  0.608
PP1S10_24V6.1
Delta tubulin (473 aa)
         
  0.608
PP1S183_85V6.1
Predicted protein (293 aa)
     
 
  0.608
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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