• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
CYCD protein (Physcomitrella patens) - STRING interaction network
"CYCD" - Cyclin D in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYCDCyclin D;2; Predicted protein ; Belongs to the cyclin family (362 aa)    
Predicted Functional Partners:
CDKB
Cyclin-dependent kinase B;1; Predicted protein ; Belongs to the protein kinase superfamily (308 aa)
     
 
  0.970
CDKA
Cyclin-dependent kinase A;2; Predicted protein ; Belongs to the protein kinase superfamily (294 aa)
     
 
  0.962
RBL1502
Retinoblastoma-related protein;2 (1071 aa)
     
 
  0.928
PP1S174_129V6.1
annotation not available (158 aa)
     
 
  0.928
PP1S174_126V6.1
annotation not available (317 aa)
     
 
  0.928
PP1S124_108V6.1
Retinoblastoma-related protein;3 (1080 aa)
     
 
  0.928
PP1S61_200V6.1
Predicted protein; Belongs to the protein kinase superfamily (302 aa)
     
 
  0.909
PP1S59_12V6.1
annotation not available (135 aa)
     
 
  0.909
PP1S45_169V6.1
Predicted protein; Belongs to the protein kinase superfamily (302 aa)
     
 
  0.909
PP1S397_37V6.1
Predicted protein; Belongs to the protein kinase superfamily (303 aa)
     
 
  0.909
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (11%) [HD]