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STRINGSTRING
PP1S24_7V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S24_7V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S24_7V6.1Predicted protein (2058 aa)    
Predicted Functional Partners:
PP1S381_24V6.1
Predicted protein (305 aa)
   
  0.996
PP1S198_161V6.1
Predicted protein (310 aa)
   
  0.996
PP1S51_215V6.1
Predicted protein (598 aa)
   
 
  0.991
PP1S13_142V6.1
Predicted protein; Belongs to the TrpA family (347 aa)
   
 
  0.960
PP1S28_168V6.2
Chorismate synthase (466 aa)
   
 
  0.937
PP1S43_232V6.1
Predicted protein; Imidazole glycerol phosphate synthase subunit hisF ; Belongs to the HisA/HisF family (617 aa)
   
   
  0.936
PP1S175_129V6.1
Predicted protein (423 aa)
   
 
  0.932
MENG
2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic; Involved in the biosynthesis of phylloquinone (vitamin K1). Methyltransferase required for the conversion of 2-phytyl- 1,4-beta-naphthoquinol to phylloquinol (306 aa)
   
   
  0.928
PP1S47_23V6.1
Chorismate mutase (316 aa)
   
 
  0.920
PP1S142_106V6.1
Predicted protein (488 aa)
   
 
  0.920
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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