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PP1S24_97V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S24_97V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S24_97V6.1Predicted protein (429 aa)    
Predicted Functional Partners:
PP1S125_58V6.2
Predicted protein (570 aa)
 
 
  0.999
PP1S230_64V6.1
Annotation not available (569 aa)
 
 
  0.998
PP1S75_250V6.2
Predicted protein (522 aa)
 
   
0.990
PP1S175_104V6.1
Predicted protein (616 aa)
 
   
0.987
PP1S286_5V6.1
Predicted protein (598 aa)
 
   
0.986
PP1S189_43V6.1
Predicted protein (606 aa)
   
   
 
0.966
PP1S86_234V6.1
Predicted protein (238 aa)
 
 
  0.951
PP1S54_206V6.1
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (234 aa)
 
  0.921
PP1S15_401V6.2
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (230 aa)
 
  0.921
PP1S343_45V6.1
Predicted protein (304 aa)
 
  0.873
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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