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STRINGSTRING
PP1S24_97V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S24_97V6.1" - annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S24_97V6.1annotation not available (429 aa)    
Predicted Functional Partners:
PP1S125_58V6.2
Predicted protein (570 aa)
 
 
  0.966
PP1S74_44V6.1
Predicted protein (280 aa)
       
    0.901
PP1S75_250V6.2
Predicted protein (522 aa)
   
   
0.794
PP1S343_45V6.1
Predicted protein (304 aa)
 
   
  0.750
PP1S302_56V6.1
annotation not available (1177 aa)
     
 
  0.725
PP1S268_3V6.1
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins (304 aa)
   
   
  0.709
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
   
   
  0.702
PP1S230_64V6.1
annotation not available (569 aa)
 
   
  0.677
PP1S15_401V6.2
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (230 aa)
 
     
  0.671
PP1S54_206V6.1
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (234 aa)
 
     
  0.671
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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