STRINGSTRING
PP1S251_10V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S251_10V6.2" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S251_10V6.2Predicted protein (491 aa)    
Predicted Functional Partners:
PP1S163_25V6.1
Annotation not available (464 aa)
   
          0.525
PP1S371_10V6.1
Predicted protein (253 aa)
   
          0.524
PP1S110_33V6.1
Annotation not available (431 aa)
   
          0.523
PP1S200_26V6.1
Annotation not available (405 aa)
   
          0.522
PP1S39_313V6.1
Annotation not available (418 aa)
   
          0.521
PP1S2_276V6.1
Annotation not available (414 aa)
   
          0.521
PP1S28_21V6.1
Annotation not available (117 aa)
   
          0.520
PP1S94_153V6.1
Predicted protein (350 aa)
   
          0.515
PP1S294_14V6.1
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (434 aa)
   
          0.502
SWDB1502
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 (328 aa)
   
          0.495
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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