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STRINGSTRING
PP1S251_36V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S251_36V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S251_36V6.2Predicted protein (363 aa)    
Predicted Functional Partners:
PP1S248_62V6.2
Predicted protein (350 aa)
   
   
  0.999
PP1S153_74V6.1
Predicted protein (133 aa)
     
 
  0.949
PP1S55_203V6.1
Predicted protein (412 aa)
   
 
  0.945
PP1S369_27V6.1
Predicted protein (560 aa)
     
   
  0.886
PP1S80_179V6.1
Predicted protein (413 aa)
   
        0.885
PP1S153_193V6.5
Predicted protein (413 aa)
   
        0.885
PP1S37_41V6.1
Predicted protein (316 aa)
     
   
  0.781
PP1S85_113V6.1
Predicted protein (292 aa)
   
   
  0.779
PP1S71_244V6.2
Predicted protein (796 aa)
     
 
  0.765
PP1S347_30V6.1
Peptidyl-prolyl cis-trans isomerase (224 aa)
     
 
  0.755
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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