• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S251_37V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S251_37V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S251_37V6.1Predicted protein (636 aa)    
Predicted Functional Partners:
PP1S151_12V6.1
Predicted protein (437 aa)
     
   
  0.838
PP1S10_34V6.1
Alpha-mannosidase (1135 aa)
           
  0.775
PP1S269_66V6.1
Predicted protein (595 aa)
           
  0.743
PP1S101_254V6.2
annotation not available (338 aa)
           
  0.690
PP1S246_61V6.1
Predicted protein (369 aa)
           
  0.681
PP1S100_54V6.1
Predicted protein (447 aa)
           
  0.681
PP1S31_233V6.3
Predicted protein (533 aa)
     
   
  0.680
PP1S78_128V6.1
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls (394 aa)
           
  0.614
PP1S248_13V6.1
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls (536 aa)
           
  0.614
PP1S19_221V6.1
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls (501 aa)
           
  0.614
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (15%) [HD]