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STRINGSTRING
PP1S255_12V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S255_12V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S255_12V6.1Predicted protein (483 aa)    
Predicted Functional Partners:
PP1S36_86V6.1
annotation not available (768 aa)
     
 
  0.917
PP1S54_78V6.2
Predicted protein (639 aa)
     
 
  0.889
PP1S159_80V6.1
Predicted protein (508 aa)
     
        0.885
PP1S87_39V6.1
Predicted protein (862 aa)
     
        0.883
PP1S104_30V6.1
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (186 aa)
     
   
  0.875
PP1S286_15V6.1
Predicted protein (820 aa)
     
 
  0.871
PP1S62_85V6.1
annotation not available (523 aa)
     
        0.859
PP1S127_123V6.2
Predicted protein; Belongs to the peptidase C19 family (583 aa)
     
 
  0.812
RanB1
annotation not available (223 aa)
     
 
  0.809
PP1S44_114V6.1
annotation not available (223 aa)
     
 
  0.809
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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