STRINGSTRING
PP1S255_41V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S255_41V6.1" - Mitochondrial Rho GTPase in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S255_41V6.1Mitochondrial Rho GTPase (644 aa)    
Predicted Functional Partners:
PP1S83_25V6.1
Annotation not available (1294 aa)
     
  0.600
PP1S364_50V6.1
Predicted protein (1318 aa)
     
  0.600
PP1S199_47V6.1
Predicted protein (1349 aa)
     
  0.600
Rop4
Predicted proteinRop-family small GTPase (196 aa)
       
0.594
Rop3
Rop-family small GTPase (196 aa)
       
0.594
ROP2
Rop-family small GTPase (196 aa)
       
0.594
PP1S126_126V6.1
Predicted proteinRop-family small GTPase (196 aa)
       
0.594
PP1S75_43V6.1
Ubiquitin carboxyl-terminal hydrolase (621 aa)
     
 
    0.593
PP1S86_52V6.1
Predicted protein (1094 aa)
     
 
    0.562
PP1S37_348V6.1
Predicted protein (1343 aa)
     
 
    0.562
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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