• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PHR2b protein (Physcomitrella patens) - STRING interaction network
PHR2b AtPHR2-like CDP DNA photolyase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHR2bPHR2b AtPHR2-like CDP DNA photolyase (435 aa)    
Predicted Functional Partners:
PP1S134_37V6.1
annotation not available (1469 aa)
       
 
  0.928
PP1S107_10V6.3
Predicted protein (115 aa)
     
 
  0.853
PP1S33_113V6.1
Predicted protein (230 aa)
           
  0.840
PHR1
PHR1 AtPHR1-like type 2 CPD DNA photolyase (674 aa)
           
  0.749
PP1S69_163V6.2
annotation not available (315 aa)
           
  0.745
PP1S392_44V6.1
Predicted protein (153 aa)
     
   
  0.699
PP1S317_69V6.1
Predicted protein (710 aa)
     
   
  0.691
PP1S38_333V6.1
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (547 aa)
   
   
  0.612
PP1S371_25V6.1
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (547 aa)
   
   
  0.612
PP1S364_8V6.1
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (506 aa)
   
   
  0.612
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]