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STRINGSTRING
PP1S257_37V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S257_37V6.1" - DNA polymerase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S257_37V6.1DNA polymerase (1555 aa)    
Predicted Functional Partners:
PP1S90_95V6.1
DNA primase ; Belongs to the eukaryotic-type primase small subunit family (455 aa)
     
 
  0.999
PP1S434_20V6.1
Predicted protein (437 aa)
     
 
  0.999
PP1S145_94V6.1
Predicted protein (644 aa)
     
 
  0.999
PP1S357_37V6.1
Predicted protein (775 aa)
     
 
  0.998
PP1S49_109V6.1
Predicted protein (599 aa)
     
 
  0.996
PP1S3_424V6.1
annotation not available (153 aa)
     
 
  0.995
PP1S31_86V6.1
DNA helicase; Belongs to the MCM family (713 aa)
     
 
  0.995
PP1S35_109V6.1
Predicted protein; Belongs to the MCM family (809 aa)
     
 
  0.995
PP1S28_266V6.1
DNA helicase; Belongs to the MCM family (921 aa)
     
 
  0.995
PP1S127_26V6.1
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication (523 aa)
     
 
  0.994
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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