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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S257_49V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S257_49V6.2" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S257_49V6.2annotation not available (434 aa)    
Predicted Functional Partners:
PP1S272_35V6.1
Predicted protein (231 aa)
           
  0.703
PP1S165_115V6.1
Predicted protein (389 aa)
           
  0.703
PP1S21_342V6.1
Predicted protein (231 aa)
           
  0.628
PP1S440_18V6.1
annotation not available (539 aa)
     
   
  0.599
PP1S196_114V6.1
annotation not available (440 aa)
     
   
  0.599
PP1S15_334V6.1
annotation not available (593 aa)
     
   
  0.599
PP1S3_529V6.1
annotation not available (549 aa)
           
  0.591
PP1S33_37V6.1
Predicted protein (158 aa)
           
  0.546
PP1S76_155V6.3
Predicted protein (160 aa)
           
  0.544
PP1S317_8V6.1
annotation not available (907 aa)
     
   
  0.541
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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