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STRINGSTRING
PP1S257_72V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S257_72V6.1" - Polyadenylate-binding protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S257_72V6.1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (650 aa)    
Predicted Functional Partners:
PP1S141_20V6.1
Predicted protein (675 aa)
     
 
  0.957
PP1S54_148V6.1
Predicted protein (576 aa)
     
 
  0.951
PP1S59_306V6.1
annotation not available (721 aa)
     
 
  0.939
PP1S358_21V6.1
Predicted protein (778 aa)
     
 
  0.939
PP1S96_61V6.1
Predicted protein (2435 aa)
     
 
  0.930
PP1S96_133V6.1
Predicted protein (2178 aa)
     
 
  0.930
PP1S65_89V6.1
annotation not available (861 aa)
     
 
  0.930
PP1S65_80V6.1
annotation not available (863 aa)
     
 
  0.930
PP1S65_106V6.1
annotation not available (857 aa)
     
 
  0.930
PP1S34_182V6.1
annotation not available (854 aa)
     
 
  0.930
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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