• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Rop3 protein (Physcomitrella patens) - STRING interaction network
"Rop3" - Rop-family small GTPase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rop3Rop-family small GTPase ; Belongs to the small GTPase superfamily. Rho family (196 aa)    
Predicted Functional Partners:
PP1S344_11V6.1
annotation not available (2091 aa)
     
 
  0.951
PP1S23_341V6.1
Predicted protein (357 aa)
       
 
  0.935
PP1S67_121V6.1
Predicted protein (252 aa)
     
 
  0.928
PP1S67_110V6.1
Predicted protein (252 aa)
     
 
  0.928
PP1S198_106V6.1
Predicted protein (256 aa)
     
 
  0.928
PP1S78_26V6.1
annotation not available (944 aa)
       
 
  0.925
PP1S271_62V6.1
Predicted protein (922 aa)
       
 
  0.925
PP1S88_186V6.1
Predicted protein (1189 aa)
   
 
  0.907
PP1S81_123V6.1
Predicted protein (1194 aa)
   
 
  0.907
PP1S60_296V6.1
Predicted protein; Belongs to the DOCK family (1740 aa)
       
 
  0.864
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]