STRINGSTRING
PP1S258_49V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S258_49V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S258_49V6.1Predicted protein (350 aa)    
Predicted Functional Partners:
PP1S71_43V6.1
Predicted protein (477 aa)
       
      0.927
ALDH7A
Antiquitin (511 aa)
       
      0.895
PP1S32_119V6.1
Predicted protein (452 aa)
       
      0.892
PP1S96_73V6.1
Predicted protein (671 aa)
       
      0.665
PP1S91_78V6.1
Predicted protein (473 aa)
       
      0.665
PP1S7856_1V6.1
Predicted protein (284 aa)
       
      0.665
PP1S402_16V6.1
Predicted protein (758 aa)
       
      0.665
PP1S6_422V6.1
Predicted protein (627 aa)
       
      0.637
PP1S61_82V6.1
Annotation not available (592 aa)
       
      0.637
PP1S54_126V6.1
Predicted protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln) (560 aa)
       
      0.637
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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