• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S25_340V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S25_340V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S25_340V6.1annotation not available (286 aa)    
Predicted Functional Partners:
PP1S159_159V6.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (162 aa)
     
 
  0.921
PP1S199_128V6.1
Predicted protein (494 aa)
           
  0.887
PP1S26_47V6.1
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (394 aa)
           
  0.843
PP1S68_6V6.1
Predicted protein (1048 aa)
           
  0.840
PP1S150_16V6.1
Predicted protein (763 aa)
           
  0.840
PP1S223_105V6.3
Predicted protein (398 aa)
           
  0.835
PP1S123_33V6.1
Predicted protein (308 aa)
           
  0.781
PP1S392_16V6.1
Predicted protein (316 aa)
           
  0.692
PP1S124_67V6.1
Predicted protein (316 aa)
           
  0.692
PP1S314_33V6.1
Predicted protein (334 aa)
           
  0.593
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]