STRINGSTRING
PP1S25_66V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S25_66V6.2" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S25_66V6.2Predicted protein (326 aa)    
Predicted Functional Partners:
psbT
Photosystem II protein T (230 aa)
   
 
 
  0.966
PP1S121_54V6.1
Predicted protein (246 aa)
   
   
  0.896
PP1S345_25V6.1
Predicted protein (246 aa)
   
   
  0.896
PP1S19_276V6.1
Predicted protein (246 aa)
   
   
  0.895
PP1S80_23V6.1
Predicted protein (155 aa)
   
   
  0.889
psbH
Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water-plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation (74 aa)
   
 
  0.801
PP1S60_65V6.1
Predicted protein (327 aa)
   
   
 
0.801
PP1S306_84V6.1
Predicted protein (326 aa)
   
   
 
0.801
PP1S63_71V6.1
Predicted protein (268 aa)
   
   
  0.702
PP1S135_79V6.1
Predicted protein (268 aa)
   
   
  0.694
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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