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STRINGSTRING
PP1S25_84V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S25_84V6.1" - HYDIN in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S25_84V6.1HYDIN (1450 aa)    
Predicted Functional Partners:
PP1S276_65V6.1
Predicted protein (1322 aa)
     
   
  0.769
PP1S112_45V6.1
Predicted protein (2638 aa)
     
   
  0.634
PP1S173_97V6.1
Radial spoke protein 9 (349 aa)
     
   
  0.619
PP1S154_15V6.1
Radial spoke protein 11 (217 aa)
     
   
  0.573
PP1S13_215V6.1
Predicted protein (434 aa)
     
   
  0.561
PP1S22_50V6.1
Predicted protein (2742 aa)
           
  0.558
PP1S53_150V6.1
annotation not available (288 aa)
     
   
  0.552
PP1S207_118V6.1
annotation not available (1610 aa)
     
   
  0.548
PP1S39_104V6.1
Predicted protein (744 aa)
           
  0.545
PP1S62_19V6.1
annotation not available (620 aa)
     
   
  0.539
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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