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STRINGSTRING
PP1S263_2V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S263_2V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S263_2V6.1Predicted protein (295 aa)    
Predicted Functional Partners:
PP1S275_20V6.1
annotation not available (1058 aa)
     
 
  0.994
PP1S3931_3V6.1
annotation not available (271 aa)
   
   
  0.935
PP1S223_54V6.1
DNA ligase (776 aa)
   
   
  0.935
PP1S164_27V6.1
annotation not available (533 aa)
       
 
  0.923
PP1S143_27V6.1
Predicted protein (202 aa)
     
 
  0.922
PP1S143_26V6.1
annotation not available (169 aa)
     
 
  0.922
PP1S121_27V6.1
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase (681 aa)
     
   
  0.920
PP1S46_194V6.2
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
 
  0.917
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
     
 
  0.917
PP1S18_30V6.1
annotation not available (235 aa)
     
 
  0.911
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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