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ppabcf2 protein (Physcomitrella patens) - STRING interaction network
"ppabcf2" - ATP-binding cassette transporter, subfamily F, member 1 protein PpABCF2 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppabcf2ATP-binding cassette transporter, subfamily F, member 1 protein PpABCF2 (597 aa)    
Predicted Functional Partners:
PP1S402_8V6.1
annotation not available (605 aa)
     
   
  0.778
PP1S233_94V6.1
annotation not available (605 aa)
     
   
  0.778
PP1S12_74V6.1
annotation not available (1719 aa)
     
 
  0.752
PP1S395_30V6.1
Predicted protein (57 aa)
     
      0.736
ppabci8
ATP-binding cassette transporter, subfamily I, member 8, ABC component protein PpABCI8 (351 aa)
   
   
  0.652
ppabci18
annotation not available (260 aa)
   
   
  0.652
ppabcd5
ATP-binding cassette transporter, subfamily D, member 5, group PMP protein PpABCD5 (1383 aa)
     
   
  0.628
ppabcd6
ATP-binding cassette transporter, subfamily D, member 6, group PMP protein PpABCD6 (1342 aa)
     
   
  0.628
PP1S47_286V6.1
annotation not available (624 aa)
   
 
  0.610
PP1S16_274V6.1
annotation not available (207 aa)
     
   
  0.578
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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