STRINGSTRING
PP1S267_85V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S267_85V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S267_85V6.1Annotation not available (387 aa)    
Predicted Functional Partners:
PP1S403_39V6.1
Predicted protein; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis (245 aa)
   
 
  0.978
PP1S222_58V6.1
Predicted protein; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis (245 aa)
   
 
  0.978
PP1S20_121V6.1
Annotation not available (436 aa)
     
 
  0.976
PP1S100_108V6.1
Predicted protein (520 aa)
     
 
  0.976
PP1S68_78V6.1
Predicted protein (1033 aa)
     
 
  0.967
PP1S34_144V6.1
Annotation not available (97 aa)
     
 
  0.967
PP1S47_286V6.1
Annotation not available (624 aa)
     
 
  0.951
PP1S74_148V6.1
Predicted protein (161 aa)
   
 
  0.926
PP1S63_123V6.1
Predicted protein (161 aa)
   
 
  0.926
PP1S60_272V6.1
Predicted protein (161 aa)
   
 
  0.926
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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