STRINGSTRING
PP1S269_44V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S269_44V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S269_44V6.1annotation not available (1210 aa)    
Predicted Functional Partners:
PP1S391_5V6.1
Predicted protein (554 aa)
     
 
  0.848
PP1S25_65V6.2
annotation not available (843 aa)
     
        0.832
PP1S73_48V6.1
Predicted protein (998 aa)
     
        0.783
PP1S161_106V6.1
Predicted protein (228 aa)
     
   
  0.776
PP1S343_50V6.1
Predicted protein (165 aa)
           
  0.710
PP1S257_13V6.1
Predicted protein (167 aa)
           
  0.710
PP1S57_34V6.1
Predicted protein (656 aa)
           
  0.638
PP1S124_125V6.1
Predicted protein (136 aa)
           
  0.605
PP1S42_258V6.1
Predicted protein (397 aa)
     
      0.584
PP1S71_2V6.1
annotation not available (141 aa)
           
  0.553
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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