STRINGSTRING
PP1S269_46V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S269_46V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S269_46V6.1Predicted protein (146 aa)    
Predicted Functional Partners:
PP1S6_239V6.1
Predicted protein (308 aa)
           
  0.511
PP1S1_534V6.1
Predicted protein (322 aa)
           
  0.511
PP1S1_532V6.1
Predicted protein (715 aa)
           
  0.489
PP1S72_197V6.1
Predicted protein; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis (350 aa)
           
  0.424
PP1S54_12V6.1
Chloroplast Toc34-3 (350 aa)
           
  0.424
PP1S7_405V6.1
Predicted protein (550 aa)
           
  0.407
PP1S69_199V6.1
Predicted protein (410 aa)
           
  0.407
PP1S509_22V6.2
Predicted protein (1030 aa)
           
  0.407
PP1S282_30V6.1
Predicted protein (378 aa)
           
  0.407
PP1S26_23V6.1
Predicted protein (1029 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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