STRINGSTRING
PP1S269_48V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S269_48V6.1" - Histone H4 in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S269_48V6.1Histone H4 (103 aa)    
Predicted Functional Partners:
PP1S355_21V6.1
Annotation not available (752 aa)
     
  0.980
PP1S2_36V6.1
Annotation not available (563 aa)
     
  0.980
PP1S206_25V6.1
Annotation not available (458 aa)
       
  0.978
NFC1501
Nucleosome remodeling factor, p48 subunit (422 aa)
       
  0.978
SDG1518
Histone methyltransferase Su3-9 group (591 aa)
     
  0.966
SDG1520
Predicted protein (718 aa)
     
  0.966
SDG1519
Histone methyltransferase Su3-9 group (757 aa)
     
  0.966
HTR1501
Histone H3 (199 aa)
     
  0.966
PP1S96_114V6.1
Histone H3 (136 aa)
     
  0.966
HTR1516
Histone H3 (128 aa)
     
  0.966
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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