• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S269_55V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S269_55V6.2" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S269_55V6.2annotation not available (350 aa)    
Predicted Functional Partners:
PP1S51_193V6.1
annotation not available (526 aa)
     
 
  0.952
PP1S257_71V6.1
Predicted protein (523 aa)
     
 
  0.952
PP1S58_188V6.1
Predicted protein; Belongs to the PI3/PI4-kinase family (891 aa)
     
 
  0.950
PP1S227_54V6.1
annotation not available (409 aa)
     
   
  0.844
PP1S102_138V6.1
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (98 aa)
           
  0.831
PP1S99_254V6.1
annotation not available (1775 aa)
     
 
  0.809
PP1S213_128V6.1
annotation not available (1773 aa)
     
 
  0.809
PP1S73_159V6.1
Predicted protein (692 aa)
     
   
  0.800
PP1S62_116V6.3
annotation not available (307 aa)
     
   
  0.790
PP1S232_86V6.1
Predicted protein (217 aa)
     
   
  0.772
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (15%) [HD]