• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
VPS33 protein (Physcomitrella patens) - STRING interaction network
"VPS33" - SM/Sec1-family protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS33SM/Sec1-family protein ; Belongs to the STXBP/unc-18/SEC1 family (605 aa)    
Predicted Functional Partners:
PP1S223_98V6.1
Predicted protein (837 aa)
     
 
  0.999
PP1S88_37V6.1
annotation not available (1024 aa)
     
 
  0.999
PP1S104_112V6.1
annotation not available (948 aa)
     
 
  0.999
SNAP29
Qb+Qc-SNARE, SNAP33-family (269 aa)
     
 
  0.991
PP1S396_8V6.1
annotation not available (1069 aa)
     
 
  0.990
PP1S51_78V6.1
annotation not available (1015 aa)
     
 
  0.966
PP1S53_164V6.1
Predicted protein (1109 aa)
     
 
  0.962
PP1S2_324V6.1
annotation not available (1948 aa)
     
 
  0.960
PP1S193_48V6.1
Predicted protein (2061 aa)
     
 
  0.960
PP1S35_276V6.1
Predicted protein (749 aa)
     
 
  0.958
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]