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STRINGSTRING
PP1S26_117V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S26_117V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S26_117V6.1Predicted protein (245 aa)    
Predicted Functional Partners:
PP1S70_275V6.1
Predicted protein (241 aa)
       
      0.805
PP1S55_210V6.1
Predicted protein (265 aa)
       
      0.805
PP1S411_22V6.1
Predicted protein (269 aa)
       
      0.805
PP1S31_190V6.1
Predicted protein (268 aa)
       
      0.805
PP1S207_12V6.1
Predicted protein (268 aa)
       
      0.805
PP1S13_238V6.1
Predicted protein (248 aa)
       
      0.612
PP1S51_99V6.1
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (205 aa)
       
      0.571
PP1S30_355V6.1
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (207 aa)
       
      0.571
PP1S257_28V6.2
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (207 aa)
       
      0.571
PP1S126_63V6.1
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (204 aa)
       
      0.571
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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