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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S26_143V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S26_143V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S26_143V6.1annotation not available (70 aa)    
Predicted Functional Partners:
PP1S293_87V6.2
Predicted protein (312 aa)
   
 
  0.821
PP1S114_124V6.1
Adenine phosphoribosyltransferase (286 aa)
     
      0.788
PP1S276_103V6.1
Predicted protein (914 aa)
         
  0.682
PP1S1735_2V6.1
Predicted protein (370 aa)
   
   
  0.635
PP1S195_48V6.2
Mannose-6-phosphate isomerase ; Belongs to the mannose-6-phosphate isomerase type 1 family (430 aa)
   
   
  0.614
PP1S15_422V6.2
Mannose-6-phosphate isomerase ; Belongs to the mannose-6-phosphate isomerase type 1 family (427 aa)
   
   
  0.614
PP1S211_20V6.1
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P; Belongs to the phosphohexose mutase family (579 aa)
   
   
  0.594
PP1S152_87V6.2
Predicted protein (617 aa)
   
   
  0.594
PP1S12_229V6.1
Predicted protein (294 aa)
         
  0.585
PP1S110_19V6.1
annotation not available (301 aa)
         
  0.578
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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