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STRINGSTRING
PP1S270_35V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S270_35V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S270_35V6.1Predicted protein (256 aa)    
Predicted Functional Partners:
PP1S8_163V6.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family (521 aa)
         
    0.900
PP1S68_116V6.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family (526 aa)
         
    0.900
PP1S34_308V6.2
Glutamate decarboxylase; Belongs to the group II decarboxylase family (548 aa)
         
    0.900
PP1S10_153V6.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family (522 aa)
         
    0.900
PP1S194_97V6.1
Predicted protein (352 aa)
         
 
0.800
PP1S333_56V6.1
Predicted protein (703 aa)
           
  0.619
PP1S3_343V6.1
Predicted protein; Belongs to the FPP/GGPP synthase family (387 aa)
     
   
  0.564
PP1S167_155V6.1
Predicted protein; Belongs to the FPP/GGPP synthase family (387 aa)
     
   
  0.564
PP1S123_8V6.1
Predicted protein (430 aa)
     
        0.541
PP1S3_520V6.1
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (166 aa)
           
  0.525
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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