• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S270_57V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S270_57V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S270_57V6.1Predicted protein (296 aa)    
Predicted Functional Partners:
PP1S35_78V6.1
Cytochrome b6-f complex iron-sulfur subunit (231 aa)
   
   
  0.977
PP1S112_169V6.1
Cytochrome b6-f complex iron-sulfur subunit (232 aa)
   
   
  0.977
PP1S79_61V6.1
Predicted protein (244 aa)
   
   
  0.964
PP1S372_16V6.1
Predicted protein (378 aa)
     
   
  0.961
PP1S35_234V6.1
Predicted protein (378 aa)
     
   
  0.961
PP1S287_61V6.2
Predicted protein (378 aa)
     
   
  0.961
PP1S30_39V6.1
Uncharacterized protein (244 aa)
     
   
  0.959
PP1S58_172V6.1
Predicted protein; Belongs to the precorrin methyltransferase family (452 aa)
   
   
  0.958
PP1S10125_1V6.1
Predicted protein; Belongs to the precorrin methyltransferase family (344 aa)
   
   
  0.958
PP1S190_86V6.1
Predicted protein (431 aa)
     
   
  0.956
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (16%) [HD]