• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S270_78V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S270_78V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S270_78V6.1annotation not available (160 aa)    
Predicted Functional Partners:
PP1S114_124V6.1
Adenine phosphoribosyltransferase (286 aa)
     
      0.683
PP1S138_42V6.1
annotation not available (639 aa)
   
        0.602
PP1S60_322V6.2
annotation not available (437 aa)
         
  0.589
PP1S79_23V6.1
annotation not available (93 aa)
     
        0.582
PP1S38_345V6.1
Predicted protein (345 aa)
     
        0.582
PP1S269_47V6.1
Predicted protein (349 aa)
     
        0.582
PP1S9_92V6.1
annotation not available (566 aa)
   
   
  0.460
PP1S455_2V6.1
Thioredoxin reductase ; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (573 aa)
   
   
  0.460
PP1S227_23V6.1
annotation not available (174 aa)
   
          0.446
PP1S19_36V6.1
Predicted protein (626 aa)
         
  0.432
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]