STRINGSTRING
PP1S270_88V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S270_88V6.2" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S270_88V6.2Predicted protein (522 aa)    
Predicted Functional Partners:
PP1S1_845V6.1
Predicted protein (395 aa)
       
      0.684
PP1S37_355V6.1
Predicted protein (652 aa)
     
   
  0.530
PP1S7_102V6.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1712 aa)
           
  0.476
PP1S452_30V6.1
Clathrin heavy chain ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1749 aa)
           
  0.476
PP1S270_53V6.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1693 aa)
           
  0.476
PP1S147_10V6.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1709 aa)
           
  0.476
PP1S25_241V6.2
Predicted protein (214 aa)
       
      0.472
PP1S217_25V6.1
Predicted protein (216 aa)
       
      0.472
PP1S158_50V6.1
Predicted protein (218 aa)
       
      0.472
PP1S115_20V6.1
Predicted protein (213 aa)
       
      0.472
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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