• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S271_57V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S271_57V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S271_57V6.1annotation not available (495 aa)    
Predicted Functional Partners:
PP1S49_280V6.1
Predicted protein (429 aa)
           
  0.550
PP1S198_172V6.1
Predicted protein (964 aa)
           
  0.527
PP1S181_63V6.1
Predicted protein (969 aa)
           
  0.527
PP1S88_199V6.1
Predicted protein (1369 aa)
     
 
  0.513
PP1S26_271V6.1
annotation not available (1400 aa)
     
 
  0.513
PP1S199_73V6.2
annotation not available (1405 aa)
     
 
  0.513
PP1S124_156V6.1
Predicted protein (1400 aa)
     
 
  0.513
PP1S197_115V6.1
Predicted protein (310 aa)
           
  0.468
PP1S111_146V6.1
Predicted protein (523 aa)
           
  0.426
PP1S41_292V6.1
Predicted protein (956 aa)
     
   
  0.425
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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