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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S273_57V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S273_57V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S273_57V6.1Predicted protein (210 aa)    
Predicted Functional Partners:
PP1S88_103V6.1
annotation not available (769 aa)
           
  0.526
PP1S7_501V6.1
Uncharacterized protein (685 aa)
           
  0.526
PP1S15_107V6.1
annotation not available (912 aa)
           
  0.526
PP1S88_225V6.1
Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (497 aa)
           
  0.525
PP1S307_77V6.2
Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (538 aa)
           
  0.525
PP1S10_36V6.1
annotation not available (701 aa)
           
  0.525
PP1S16_326V6.3
annotation not available (194 aa)
           
  0.514
PP1S63_96V6.2
Predicted protein (548 aa)
     
   
  0.433
PP1S236_9V6.1
annotation not available (270 aa)
           
  0.433
PP1S15_437V6.1
Predicted protein (306 aa)
     
   
  0.432
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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