STRINGSTRING
PP1S274_75V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S274_75V6.2" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S274_75V6.2Annotation not available (245 aa)    
Predicted Functional Partners:
PP1S148_87V6.1
Predicted protein (460 aa)
       
  0.972
PP1S67_260V6.1
Predicted protein (866 aa)
       
  0.972
PP1S63_63V6.1
Predicted protein (1048 aa)
       
  0.972
PP1S427_40V6.1
Predicted protein (867 aa)
       
  0.972
PP1S40_145V6.1
Predicted protein (868 aa)
       
  0.972
PP1S264_75V6.1
Predicted protein (1022 aa)
       
  0.972
PP1S20_97V6.1
Predicted protein (488 aa)
       
  0.972
PP1S18_231V6.1
Predicted protein (841 aa)
       
  0.972
PP1S135_103V6.1
Predicted protein (1055 aa)
       
  0.972
PP1S11_57V6.1
Predicted protein (1062 aa)
       
  0.972
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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