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STRINGSTRING
PP1S276_100V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S276_100V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S276_100V6.1Predicted protein (618 aa)    
Predicted Functional Partners:
PP1S382_38V6.1
Predicted protein (443 aa)
           
  0.698
PP1S156_74V6.1
annotation not available (373 aa)
           
  0.690
PP1S204_101V6.1
annotation not available (1507 aa)
           
  0.689
PP1S142_33V6.1
Predicted protein (1037 aa)
           
  0.689
PP1S213_25V6.1
Predicted protein (318 aa)
           
  0.578
PP1S181_93V6.1
Predicted protein (395 aa)
           
  0.578
PP1S181_103V6.1
annotation not available (387 aa)
           
  0.578
PP1S304_15V6.1
Predicted protein (229 aa)
           
  0.575
PP1S2633_1V6.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (701 aa)
     
 
  0.556
PP1S13_273V6.1
Predicted protein (548 aa)
           
  0.525
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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