• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S276_11V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S276_11V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S276_11V6.1annotation not available (193 aa)    
Predicted Functional Partners:
PP1S54_220V6.2
Predicted protein (1183 aa)
           
  0.686
PP1S240_31V6.1
Predicted protein (193 aa)
           
  0.604
PP1S54_207V6.2
Predicted protein (272 aa)
           
  0.603
PP1S231_24V6.1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family (161 aa)
           
  0.552
PP1S115_132V6.1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family (161 aa)
           
  0.552
PP1S91_93V6.1
Predicted protein (218 aa)
           
  0.531
PP1S460_13V6.1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family (143 aa)
           
  0.520
PP1S321_10V6.1
Predicted protein (228 aa)
           
  0.520
PP1S206_32V6.1
Predicted protein (523 aa)
           
  0.518
PP1S35_31V6.1
Predicted protein (584 aa)
           
  0.505
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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