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STRINGSTRING
PP1S2770_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S2770_1V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S2770_1V6.1Predicted protein (307 aa)    
Predicted Functional Partners:
PP1S475_19V6.1
Predicted protein (446 aa)
     
      0.827
PP1S58_147V6.1
annotation not available (1356 aa)
   
   
  0.818
PP1S28_168V6.2
Chorismate synthase (466 aa)
   
   
  0.729
PP1S1_661V6.3
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 Methylthioribulose-1-phosphate dehydratase Enolase-phosphatase E1; In the C-terminal section; belongs to the HAD-like hydrolase superfamily. MasA/MtnC family (505 aa)
         
  0.702
PP1S214_85V6.1
Predicted protein (1090 aa)
     
   
  0.644
PP1S212_59V6.2
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA); Belongs to the NadC/ModD family (411 aa)
     
   
  0.634
PP1S53_153V6.3
Predicted protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (534 aa)
   
   
  0.633
PP1S355_46V6.2
Predicted protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (493 aa)
   
   
  0.633
PP1S32_198V6.1
Predicted protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (482 aa)
   
   
  0.633
PP1S47_23V6.1
Chorismate mutase (316 aa)
     
   
  0.624
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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