STRINGSTRING
psbH protein (Physcomitrella patens) - STRING interaction network
"psbH" - Photosystem II reaction center protein H in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psbHPhotosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water-plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation (74 aa)    
Predicted Functional Partners:
psbT
Photosystem II protein T (230 aa)
   
 
  0.986
psbZ
Photosystem II protein Z ; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna (62 aa)
   
 
  0.976
PP1S43_234V6.1
Predicted protein (739 aa)
       
 
  0.926
petD
Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (97 aa)
   
   
  0.856
petB
Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (162 aa)
   
   
  0.855
PP1S41_281V6.1
Predicted protein (232 aa)
     
      0.854
PP1S421_3V6.1
Predicted protein (326 aa)
   
 
  0.805
PP1S306_84V6.1
Predicted protein (326 aa)
   
 
  0.802
PP1S25_66V6.2
Predicted protein (326 aa)
   
 
  0.801
PP1S60_65V6.1
Predicted protein (327 aa)
   
 
  0.800
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (14%) [HD]