STRINGSTRING
PP1S27_326V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S27_326V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S27_326V6.1Annotation not available (133 aa)    
Predicted Functional Partners:
PP1S1_793V6.1
Annotation not available (291 aa)
     
      0.897
PP1S91_15V6.1
Predicted protein (211 aa)
     
      0.894
PP1S74_265V6.1
Predicted protein (209 aa)
     
      0.894
PP1S37_63V6.1
Predicted protein (212 aa)
     
      0.894
PP1S19_202V6.1
Predicted protein (188 aa)
     
      0.878
PP1S167_18V6.1
Predicted protein (187 aa)
     
      0.878
PP1S33_304V6.1
Annotation not available (133 aa)
         
 
0.800
PP1S102_176V6.1
50S ribosomal protein L34 (159 aa)
         
    0.800
PP1S46_69V6.1
Predicted protein (221 aa)
     
   
  0.723
PP1S204_118V6.3
Predicted protein (262 aa)
     
   
  0.723
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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