STRINGSTRING
PP1S285_41V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S285_41V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S285_41V6.1Annotation not available (822 aa)    
Predicted Functional Partners:
PP1S335_46V6.1
Predicted protein (585 aa)
     
 
  0.959
PP1S40_279V6.1
Predicted protein (311 aa)
       
 
  0.952
PP1S239_37V6.1
Annotation not available (907 aa)
       
      0.886
PP1S116_90V6.1
Annotation not available (1361 aa)
     
 
    0.686
PP1S2_109V6.1
Annotation not available (443 aa)
     
 
  0.642
PP1S1_778V6.1
Uncharacterized protein (810 aa)
     
 
    0.590
PP1S125_31V6.1
Annotation not available (792 aa)
     
 
    0.544
PP1S303_66V6.1
Predicted protein (461 aa)
     
 
  0.495
PP1S235_30V6.1
Predicted protein (461 aa)
     
 
  0.495
PP1S242_65V6.1
Predicted protein; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage (173 aa)
           
  0.472
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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