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STRINGSTRING
PP1S286_15V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S286_15V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S286_15V6.1Predicted protein (820 aa)    
Predicted Functional Partners:
PP1S136_220V6.1
Predicted protein (260 aa)
     
 
  0.995
PP1S28_215V6.1
Uncharacterized protein (475 aa)
     
 
  0.993
PP1S20_156V6.1
annotation not available (187 aa)
     
 
  0.992
PP1S19_57V6.1
annotation not available (478 aa)
     
 
  0.992
PP1S18_81V6.1
annotation not available (920 aa)
     
 
  0.992
PP1S347_32V6.2
Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation (650 aa)
     
 
  0.992
PP1S134_124V6.1
Predicted protein (460 aa)
     
 
  0.992
PP1S134_120V6.1
annotation not available (4697 aa)
     
 
  0.992
PP1S80_199V6.1
Predicted protein (377 aa)
     
 
  0.992
PP1S264_34V6.1
Predicted protein (399 aa)
     
 
  0.992
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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