STRINGSTRING
PP1S286_33V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S286_33V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S286_33V6.1Annotation not available (322 aa)    
Predicted Functional Partners:
PP1S7_267V6.1
Predicted protein (486 aa)
     
  0.993
PP1S65_153V6.1
Predicted protein (493 aa)
     
  0.993
PP1S28_26V6.1
Predicted protein (486 aa)
     
  0.993
Mcb1
Predicted protein (414 aa)
     
  0.993
PP1S49_256V6.1
Predicted protein (425 aa)
     
  0.992
PP1S152_13V6.1
Predicted protein (425 aa)
     
  0.992
PP1S3_23V6.1
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (227 aa)
     
  0.992
PP1S15_286V6.1
Annotation not available (342 aa)
     
  0.991
PP1S68_29V6.1
Predicted protein (267 aa)
     
  0.990
PP1S48_71V6.1
Predicted protein (267 aa)
     
  0.990
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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